BP_TREE2PAG(1) User Contributed Perl Documentation BP_TREE2PAG(1)NAME
bp_tree2pag - convert Bio::TreeIO parseable format trees to pagel
format
SYNOPSIS
bp_tree2pag -if nexus -i file.nexus > file.pag
# OR pipe in through STDIN, and use newick format instead
cat file.newick | bp_tree2pag -if newick > file.nh
# OR specify an output and input
bp_tree2pag -o file.pag -i file.newick
DESCRIPTION
Convert TreeIO parseable files into Pagel format tree files. Be warned
that pagel format only really supports a single tree per file so. Also
Pagel parsing is not yet available in bioperl.
perl v5.20.2 2015-09-15 BP_TREE2PAG(1)
