BP_PARSE_HMMSEARCH(1) User Contributed Perl DocumentationBP_PARSE_HMMSEARCH(1)NAME
bp_parse_hmmsearch - parse single/multiple HMMSEARCH results file(s)
with
different output options
SYNOPSIS
bp_parse_hmmsearch [--po] [--ps] -s hmmsearch_file
bp_parse_hmmsearch [--po] [--ps] -m index_file
DESCRIPTION
Mandatory Options:
-s HMMSEARCH file to parse.
-m INDEX file that contains a list of HMMSEARCH files for multiple
parsing.
Special Options:
--po Print only the hits that have positive scores.
--ps Print the total of positive scores found.
--help Show this documentation.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of
the bugs and their resolution. Bug reports can be submitted via the
web:
https://github.com/bioperl/bioperl-live/issues
AUTHOR
Mauricio Herrera Cuadra <mauricio at open-bio.org>
perl v5.20.2 2015-09-15 BP_PARSE_HMMSEARCH(1)