bp_tree2pag.pl man page on Pidora

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BP_TREE2PAG(1)	      User Contributed Perl Documentation	BP_TREE2PAG(1)

NAME
       tree2pag - convert Bio::TreeIO parseable format trees to pagel format

SYNOPSIS
	tree2pag -if nexus -i file.nexus > file.pag

	# OR pipe in through STDIN, and use newick format instead

	cat file.newick | tree2pag -if newick > file.nh

	# OR specify an output and input

	tree2pag -o file.pag -i file.newick

DESCRIPTION
       Convert TreeIO parseable files into Pagel format tree files.  Be warned
       that pagel format only really supports a single tree per file so.  Also
       Pagel parsing is not yet available in bioperl.

perl v5.14.1			  2011-07-22			BP_TREE2PAG(1)
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