bp_split_seq.pl man page on DragonFly

Man page or keyword search:  
man Server   44335 pages
apropos Keyword Search (all sections)
Output format
DragonFly logo
[printable version]

BP_SPLIT_SEQ(1)	      User Contributed Perl Documentation      BP_SPLIT_SEQ(1)

       bp_split_seq - splits a sequence into equal sized chunks with an
		   overlapping range

       bp_split_seq -c 10000 [-o 1000] [-i] -f seq.in

       The script will split sequences into chunks

       Mandatory Options:

	 -c  Desired length of the resulting sequences.
	 -f  Input file (must be FASTA format).

       Special Options:

	 -o  Overlapping range between the resulting sequences.
	 -i  Create an index file with the resulting sequence files. This is
	     useful if you want to pass this list as input arguments into
	     another programs (i.e. CLUSTAL, HMMER, etc.).

   Mailing Lists
       User feedback is an integral part of the evolution of this and other
       Bioperl modules. Send your comments and suggestions preferably to the
       Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About the mailing lists

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of
       the bugs and their resolution. Bug reports can be submitted via the


	 Ewan Birney E<lt>birney-at-ebi.ac.ukE<gt>
	 Mauricio Herrera Cuadra E<lt>mauricio at open-bio.orgE<gt>
	 (some enhancements)

perl v5.20.2			  2015-09-15		       BP_SPLIT_SEQ(1)

List of man pages available for DragonFly

Copyright (c) for man pages and the logo by the respective OS vendor.

For those who want to learn more, the polarhome community provides shell access and support.

[legal] [privacy] [GNU] [policy] [cookies] [netiquette] [sponsors] [FAQ]
Polarhome, production since 1999.
Member of Polarhome portal.
Based on Fawad Halim's script.
Vote for polarhome
Free Shell Accounts :: the biggest list on the net