BP_NRDB(1) User Contributed Perl Documentation BP_NRDB(1)NAME
bp_nrdb.PLS - a script to emulate Warren Gish's nrdb, make a unique
sequence database from a set of input databases
SYNOPSIS
Usage:
bp_nrdb.PLS [options] file1 file2 file3
Alternative usage
bp_nrdb.PLS -p [options] file1 id1 file2 id2 file3 id3
DESCRIPTION
This script will create a unique database of sequences (quasi-
nonredundant). The options are:
-o filename - the filename the db is written (STDOUT by default)
-a filename - the filename to append the db to
-l# - minimum required sequence length
-i - do not check for duplicates
-n# - max number of descriptions to report per seq
-d# - delimiter to use between consecutive descriptions
-p - use database id prefixes from command line
AUTHOR
Jason Stajich, jason-at-bioperl-dot-org
perl v5.14.1 2011-07-22 BP_NRDB(1)
