Bio::Restriction::IO::withrefm man page on Pidora

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Bio::Restriction::IO::UserrContributed Perl DBio::Restriction::IO::withrefm(3)

NAME
       Bio::Restriction::IO::withrefm - withrefm enzyme set

SYNOPSIS
       Do not use this module directly.	 Use it via the Bio::Restriction::IO
       class.

DESCRIPTION
       This is the most complete format of the REBASE files, and basically
       includes all the data on each of the restriction enzymes.

FEEDBACK
   Mailing Lists
       User feedback is an integral part of the evolution of this and other
       Bioperl modules. Send your comments and suggestions preferably to the
       Bioperl mailing lists Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and
       reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the problem with code and
       data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track
       the bugs and their resolution.  Bug reports can be submitted via the
       web:

	 http://bugzilla.open-bio.org/

AUTHOR
       Rob Edwards, redwards@utmem.edu

CONTRIBUTORS
       Heikki Lehvaslaiho, heikki-at-bioperl-dot-org Mark A. Jensen, maj-at-
       fortinbras-dot-us

APPENDIX
       The rest of the documentation details each of the object methods.
       Internal methods are usually preceded with a _

   read
	Title	: read
	Usage	: $renzs = $stream->read
	Function: reads all the restrction enzymes from the stream
	Returns : a Bio::Restriction::Restriction object
	Args	: none

   _xln_sub
	Title	: _xln_sub
	Function: Translates withrefm coords to Bio::Restriction coords
	Args	: Bio::Restriction::Enzyme object, scalar integer (cut posn)
	Note	: Used internally; pass as a coderef to the B:R::Enzyme
		  constructor

   write
	Title	: write
	Usage	: $stream->write($renzs)
	Function: writes restriction enzymes into the stream
	Returns : 1 for success and 0 for error
	Args	: a Bio::Restriction::Enzyme
		  or a Bio::Restriction::EnzymeCollection object

perl v5.14.1			  2011-07-22 Bio::Restriction::IO::withrefm(3)
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