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Bio::LiveSeq::ChainI(3User Contributed Perl DocumentatiBio::LiveSeq::ChainI(3)

NAME
       Bio::LiveSeq::ChainI - Double linked chain data structure

SYNOPSIS
	 #documentation needed

DESCRIPTION
       This class generates and manipulates generic double linked list, chain,
       that can be used to manage biological sequences.

       The advantages over strings or plain arrays is the ease of tracking
       changes (mutations) in the elements (sequence). The other side of the
       coin is that these structures need consideraly more memory, but that is
       cheap and constantly inceasing resource in computers.

FEEDBACK
   Mailing Lists
       User feedback is an integral part of the evolution of this and other
       Bioperl modules. Send your comments and suggestions preferably to one
       of the Bioperl mailing lists.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and
       reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the problem with code and
       data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track
       the bugs and their resolution.  Bug reports can be submitted via the
       web:

	 http://bugzilla.open-bio.org/

AUTHOR - Joseph A.L. Insana
       Email:  Insana@ebi.ac.uk, jinsana@gmx.net

APPENDIX
       The rest of the documentation details each of the object methods.
       Internal methods are usually preceded with a _

   new
	 Title	 : new
	 Usage	 : $chain = Bio::LiveSeq::ChainI->new(-string => "thequickbrownfoxjumpsoverthelazydog",
						    -offset => 3 );
		OR $chain = Bio::LiveSeq::ChainI->new(-array => \@array,
						    -offset => 3 );
	 Function: generates a new Bio::LiveSeq:ChainI
	 Returns : a new Chain
	 Args	 : string
		OR arrayreference
	       AND optional offset to create element labels

perl v5.14.1			  2011-07-22	       Bio::LiveSeq::ChainI(3)
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