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Bio::Graphics::Glyph::UsercContributed PerBio::Graphics::Glyph::splice_site(3)

NAME
       Bio::Graphics::Glyph::splice_site - The "splice_site" glyph

SYNOPSIS
	 See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.

DESCRIPTION
       This glyph was designed to show an inverted "L" representing splice
       donors and acceptors.  The vertical part of the L points downwards and
       is positioned in the center of the range (even if the range is quite
       large).

       In addition to the usual glyph options, this glyph recognizes:

	  Option	    Value	       Description
	  ------	    -----	       -----------

	  direction	    "left" or "right"  direction the short part of the L
					       points

	  height_fraction   0.0 - 1.0	       fractional height of the glyph,
					       usually a callback that uses the
					       feature's score to determine its
					       height

BUGS
       Please report them.

SEE ALSO
       Bio::Graphics::Panel, Bio::Graphics::Glyph,
       Bio::Graphics::Glyph::arrow, Bio::Graphics::Glyph::cds,
       Bio::Graphics::Glyph::crossbox, Bio::Graphics::Glyph::diamond,
       Bio::Graphics::Glyph::dna, Bio::Graphics::Glyph::dot,
       Bio::Graphics::Glyph::ellipse, Bio::Graphics::Glyph::extending_arrow,
       Bio::Graphics::Glyph::generic, Bio::Graphics::Glyph::graded_segments,
       Bio::Graphics::Glyph::heterogeneous_segments,
       Bio::Graphics::Glyph::line, Bio::Graphics::Glyph::pinsertion,
       Bio::Graphics::Glyph::primers, Bio::Graphics::Glyph::rndrect,
       Bio::Graphics::Glyph::chromosome, Bio::Graphics::Glyph::segments,
       Bio::Graphics::Glyph::ruler_arrow, Bio::Graphics::Glyph::toomany,
       Bio::Graphics::Glyph::transcript, Bio::Graphics::Glyph::transcript2,
       Bio::Graphics::Glyph::translation, Bio::Graphics::Glyph::triangle,
       Bio::DB::GFF, Bio::SeqI, Bio::SeqFeatureI, Bio::Das, GD

AUTHOR
       Xiaokang Pan <pan@cshl.org>

       Copyright (c) 2001 BDGP

       This library is free software; you can redistribute it and/or modify it
       under the same terms as Perl itself.  See DISCLAIMER.txt for
       disclaimers of warranty.

perl v5.14.1			  2011-07-Bio::Graphics::Glyph::splice_site(3)

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