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Bio::Graphics::Glyph::User_ContributBio::Graphics::Glyph::heat_map_ideogram(3)

NAME
       Bio::Graphics::Glyph::heat_map_ideogram - The "heat_map_ideogram" glyph

SYNOPSIS
	 See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.

DESCRIPTION
       This glyph draws a chromosome ideogram using scored features instead of
       cytobands.  It is a hybrid of the heat_map and ideograms glyphs and
       accepts options for both.  A typical usage would be to pair this glyph
       with an aggregator that groups scored features such as blast hits or
       gene_density bins, etc with a centromere.  The result is a chromosome
       ideogram that has bands whose colors vary porportionate to the feature
       score.

   OPTIONS
       See Bio::Graphics::Glyph for a full explanation of standard options.

       See Bio::Graphics::Glyph::heat_map for an explanation of heat_map
       options.

       See Bio::Graphics::Glyph::ideogram for an explanation of ideogram
       options.

BUGS
       Please report them.

SEE ALSO
       Bio::Graphics::Panel, Bio::Graphics::Glyph, Bio::DB::GFF, Bio::SeqI,
       Bio::SeqFeatureI, Bio::Das, GD

AUTHOR
       Sheldon McKay <mckays@cshl.edu>

       Copyright (c) 2006 Cold Spring Harbor Laboratory

       This library is free software; you can redistribute it and/or modify it
       under the same terms as Perl itself.  See DISCLAIMER.txt for
       disclaimers of warranty.

perl v5.14.1			  20Bio::Graphics::Glyph::heat_map_ideogram(3)

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