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Bio::DB::SeqVersion(3)User Contributed Perl DocumentatioBio::DB::SeqVersion(3)
NAME
Bio::DB::SeqVersion - front end to querying databases for identifier
versions
SYNOPSIS
use Bio::DB::SeqVersion;
my $query = Bio::DB::SeqVersion->new(-type => 'gi');
my @all_gis = $query->get_all(2);
my $live_gi = $query->get_recent(2);
DESCRIPTION
The default type is 'gi'.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and
reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and
data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of
the bugs and their resolution. Bug reports can be submitted via the
web:
http://bugzilla.open-bio.org/
AUTHOR - Brian Osborne
Email bosborne at alum.mit.edu
CONTRIBUTORS
Torsten Seemann - torsten.seemann AT infotech.monash.edu.au
APPENDIX
The rest of the documentation details each of the object methods.
Internal methods are usually preceded with a _
new()
Usage : my $obj = Bio::DB::SeqVersion->new();
Function: Create a Bio::DB::SeqVersion object
Returns : An instance of Bio::DB::SeqVersion
Args : -type Identifier namespace, default is 'gi'
get_recent()
Usage :
Function:
Example :
Returns :
Args :
get_all()
Usage :
Function:
Example :
Returns :
Args :
_load_seqversion_module
Title : _load_seqversion_module
Usage : Used internally
Function: Loads up a module at run time on demand
Example :
Returns :
Args : Name of identifier type
default_id_type
Title : default_id_type
Usage : my $type = $self->default_id_type
Function: Returns default identifier type for this module
Returns : string
Args : none
perl v5.14.1 2011-07-22 Bio::DB::SeqVersion(3)
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